Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCEFISEYSEFQYDFISLAQQRFVS----VPEIDLRTM---------------IQNFGDWYFANESSSL-NTPSIWLVK-WFSWVQN--------------NEKQVAANRKKQEQITSTCQ-KPQESGYFANL-----FEEQSESQIVDVT-PAKKFPMIEEVGHA-
4DMI Chain:A ((4-176))QFRIDSESIRDKLNTLLPSQSRLSGSTTIIPVVDLTETAEGGAQREDLQKAFTLINTIDFDVENTTTTIANTPGFYKVVGNLSSRDEASGAIAVIEVTDGITTKILANNRIVSPDGTTAVQSVPVPFDLMVKLVAGDTLQARSNNAEVRVQGIARQIADVSGNLINP


General information:
TITO was launched using:
RESULT:

Template: 4DMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 221 5491 24.85 44.28
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 24.85
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.117

(partial model without unconserved sides chains):
PDB file : Tito_4DMI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DMI-query.scw
PDB file : Tito_Scwrl_4DMI.pdb: