Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSAVVVSSENLDGQQQSSSTPASPAAEKVNLLGMSRAELEKFFEDIGEKKFRAGQVMKWIHQYFVTDFAEMTNISGKLRAKLEQICEIKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQG---FQRDLTPDEIIGQLWMANYSYMEEVPVAERERSVTNVVMMGMGEPLLNYDAVLSSMHIMLDDFAYGMSKRRVTLSTSGVVPK---IDQLAKDIDVALAISLHAPNDELRNELVPINKKYPLAQLIAACQRYIAKDGNESARKHVTIEYVMLEGVNDQPEHAQQLLKLLKNLP--SKINLIPFNPFPHAPY------------GRSSRNRIISFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWQKKVAQRQEILRTQG
3C8F Chain:A ((19-245))-------------------------------------------------------------------------------------------------------------------------------------GIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFM---------NASGGGVTASG-GEAILQAEFVRDWFRACKK-EGI-----HTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGV----SNHRTLEFAKYLANK------NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKVMF--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3C8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 971 -15335 -15.79 -74.08
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -15.79
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_3C8F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C8F-query.scw
PDB file : Tito_Scwrl_3C8F.pdb: