Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYSEKVIDHYENPRNVGVLDKNSENVGTGMVGAPACGDVMRLQIQVNDN-GVIEEARFKTYGCGSAIASSSLVTEWLKGKTLDEAQAIKNIDIATELALPPVKVHCSVLAEDAIKAAIEDYRSKKSKA
1Q48 Chain:A ((1-127))MAYSEKVIDHYENPRNVGSLDKKDSNVGTGMVGAPACGDVMQLQIKVD-DNGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLEEAGAIKNSQIAEELELPPVKVHCSILAEDAIKAAIADYKAKQGL-


General information:
TITO was launched using:
RESULT:

Template: 1Q48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 502 18453 36.76 146.45
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.96

3D Compatibility (PKB) : 36.76
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.421

(partial model without unconserved sides chains):
PDB file : Tito_1Q48.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q48-query.scw
PDB file : Tito_Scwrl_1Q48.pdb: