Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNAVATDTQPLVGIIMGSQSDWATLEHTANMLKQLGVPFEAEVVSAHRTPDRLFEYAETARDRGIQVIIAGAGGAAHLPGMCAAKTDLPVLGVPVKSSILNGVDSLLSIVQMPAGIAVGTLAIGPAGATNAAIMAAQILGLTRPEIAKNVADFRAAQTDKVASNNIPGQV
4YCJ Chain:B ((21-179))-------SAPVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALFNPALAARLETWRALQTASVPNSPI----


General information:
TITO was launched using:
RESULT:

Template: 4YCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 807 -132626 -164.34 -834.12
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.88

3D Compatibility (PKB) : -164.34
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_4YCJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YCJ-query.scw
PDB file : Tito_Scwrl_4YCJ.pdb: