Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSYSPYKGKSGLKRILNATSYSISGFKAAYQNEAAFRQIVLINLVLIPVSFFLDVTRGEHALMIIVCLFAIIVELFNSTIEAVVDRVSLEKHQLSKNAKDMGSAAQFVALSIIVATWLIILFG
5DWK Chain:B ((16-126))------------FTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIG---HELSGRAKDLGSAAVLIAIIDAVITWAILLW-


General information:
TITO was launched using:
RESULT:

Template: 5DWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 224 -48324 -215.73 -447.44
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -215.73
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.358

(partial model without unconserved sides chains):
PDB file : Tito_5DWK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DWK-query.scw
PDB file : Tito_Scwrl_5DWK.pdb: