Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVLRVLVTTTALLAAGAAMADEAVVHDSYAFDKNQLIPVGARAEVGTTGYGGALLWQANPYVGLALGYNGGDISWTDDVSVNGTKYDLDMDNNNVYLNAEIRPWGASTNPWAQGLYIAAGAAYLDNDYDLAKRI-GNGDTLSIDGKNYQQAVPGQEGGVR-GKMSYKNDIAPYLGFGFAPKISKNWGVFGEVGAYYTGNPKVELTQYNLASVTGNPTSAQDAVDKEANEIRNDNKYEWMPVGKVGVNFYW
4DQJ Chain:A ((14-150))---SRVRFTTAEVDSAVARISQKIGVPASYY---QFLIPIEN-----FVVAGGFETTVSGSFRGLG-------------------QFNRQTWDGLRRLGRNLPAFEEGSAQLNASLY-AIGFLYLENKRAYEASFKGRVFTHEIAYLYHNQGAPAAEQYLTSGRLVYP-----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 572 -39586 -69.21 -293.23
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -69.21
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.249

(partial model without unconserved sides chains):
PDB file : Tito_4DQJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DQJ-query.scw
PDB file : Tito_Scwrl_4DQJ.pdb: