Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPPRIRRSVMRQFTSLQVAILALGSLCFSTAYADSTLVPMSDAELSATRGQALMSMSYIAPNDSANLEKLRDSSSNVGFYKLGLEAELEINANIRKLQLGCGGVNGAGGCDIDFDNVSLSGVADTREGRVASDAKLTNPFLEFAIKNPNSASTREVAGIRLSAEAVEGLLTIGTENSATPNGINSLSGYMVVAPQVGEATVDAARITQTGSPACGVYPSPAGCGVNQAITGKARGKIALGAGFNLDFQTKSYDITLTPTQKAQLSLPQSVVSGQRMSSVNLLASAIVNGIDLSGTLAADVDILGGITLNGNLRGTINNLPVTVPLLENLGYIHKINLSGSPLSLSMQGQDIRWPGTVSTAMRGWWLELSNPIDIGRIDPTNSVVIKTDTIRDALTEVSKELTQNPLNCGFLAVNCIGGDFNVGTRDLSNARPALLELQNLQLANQSFAPNCYGSLKFC
5CZL Chain:A ((23-337))LPRAWADT---AWESYKSRFM----------MADGRIVDTGNGSVSHTEGQGFAMLLAVAKNDRPAFDKLWQWTDKTLRNK------------------------DNGLFYWRYNPVAPDPIAD-KNDATDGDTLIAWALLRAQQQWGD-------------------------------------KSYGIASDAITASLLKSTVITFAGHQVM--LPGAKGFNRNDHVNLNPSYFI---FPAWQAFAARTHLTAWRKLQSDGKALLGKMAWGK--------AQLPSDWVALRAD--------GRMEPAKEWPPRMSYDAIRIPLYLSWA---------DPQS------------ALLTPWKSWFQSYP------RLQTPAWVNVNTNDV------APWFMTGGLLAVRDLTTGEAQDDPQLSAQD--DYYSASLKML-VWLAKNDR-----------


General information:
TITO was launched using:
RESULT:

Template: 5CZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1734 -88481 -51.03 -280.89
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -51.03
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.211

(partial model without unconserved sides chains):
PDB file : Tito_5CZL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CZL-query.scw
PDB file : Tito_Scwrl_5CZL.pdb: