Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIKSDRWIREMSE-KHGMIEPYAENQVRFDKNGEKLISYGVSSYGYDVRCAREFKVFTNVHSAIVDPKNFDEKSFIDIESDVCIIPPNSFALARTIEYFRIPRNVLTVCLGKSTYARCGIIVN-VTPLEPEWEGHVTLEFSNTTNLPARIYAGEGVAQMLFFESDEVCETSYKDRGGKYQGQTGVTLPKT
4XJC Chain:B ((1-171))-MILSGKTISEKLTEKELEITPLTEEQIQP--------------ASVDLRLGPHFVTIDDSKEAVISFERPIRYREWTTSDETIVLPPHTFLLATTMETVKLPNHLTAFVEGRSSVGRLGLFIQNAGWVDPGFNGQITLELFNANRLPIELPIGRRICQLVFAEVTGE-VAPY---QGKYLFQKGATMSE-


General information:
TITO was launched using:
RESULT:

Template: 4XJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 787 -6691 -8.50 -39.59
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -8.50
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.419

(partial model without unconserved sides chains):
PDB file : Tito_4XJC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XJC-query.scw
PDB file : Tito_Scwrl_4XJC.pdb: