Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVIALFSKNWSRTMSATIVNTTDDNFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSSEYAGKVKIVKVDVTSCEETAVKYNIRNIPALLLFKNGEVVAQQIGAVPRSKLVSFIDENV
5HR3 Chain:B ((3-105))---------------DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD---


General information:
TITO was launched using:
RESULT:

Template: 5HR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 464 -86717 -186.89 -841.91
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -186.89
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.773

(partial model without unconserved sides chains):
PDB file : Tito_5HR3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HR3-query.scw
PDB file : Tito_Scwrl_5HR3.pdb: