Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKGAIFLRPKQQLFITLLVILGALFNNISVSASAFNFSVTPITSENQIDKRKTYFDLQLDPDQEVEVKAELRNDTEKEVKID---ISVNSATTNSNVMVEYGKNEIEKDMSLIFDLVDYVSYPQIVTLKPKSVQ-----TVAFHVRMPNERFDGVLAGGITFQEIQTEKDQTETKDQSLSIENEYTYIIALLMQQTLNEVAPNLTLHEVKPDQINARNVILANVQNDQKTYINQVVIETKITKKGHSEVLYQEEKEGLQIAPNTNFSFPTALNGQPLTPGEYHLTMTVLGNENENGKFSRKKGNTTINYTNQWVFEKDFTIDGKVAKELNTTDVTIKKDNNWIYILVASLFLLFILLCILLFVLRKKEEKEK
2Y23 Chain:A ((6-312))----------TKEVVVNVD----------DDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLID--EEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEK------LSGNAKVNYIFNEKEIFEGPKYKMHIDRN-TGIIEMFMEKLQDEDE----------------GTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGP----HFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHGICTLLIT--EFSKKDAGIYEVILKDDRG-------------------KDKSRLKLVDEA


General information:
TITO was launched using:
RESULT:

Template: 2Y23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1201 83047 69.15 281.51
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 69.15
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.136

(partial model without unconserved sides chains):
PDB file : Tito_2Y23.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y23-query.scw
PDB file : Tito_Scwrl_2Y23.pdb: