Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMQAKEVVDQVTMKRALTRITYEIIERNHSIQDIVLVGIKTRGIYIASRIAERLKQLEDIDIPVGELDITLYRDD-KKENPEEPELHSSDIPVSLEGKEVILIDDVLYTGRTIRAAMDAVMDFGRPRKISLAVLVDRGHRELPIRADYVGKNIPTSRAEEILVEMQELDGQDRIMILKEED
4P86 Chain:B ((5-182))----KAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDL--TSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTSKSEKVMVQLDEVDQNDLVAIYENE-


General information:
TITO was launched using:
RESULT:

Template: 4P86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 889 -67135 -75.52 -385.83
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.90

3D Compatibility (PKB) : -75.52
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.628

(partial model without unconserved sides chains):
PDB file : Tito_4P86.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P86-query.scw
PDB file : Tito_Scwrl_4P86.pdb: