Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMNTQAKTFVRSQLFPEEMPQFLEKKKQVGILGGTFNPVHLAHLVMAEQAGRNLGLDRVFLMPSYQPPHVDEKQTIDAKHRLNMLELAVEDNPFLQIETIELARGGKSYTYDTMKELTQNNPDTDYYFIIGGDMVEYLPKWYKIDELTSMVNFVGIRRPGYTTDTPYPVIWVDVPEIDISSTKIRQKIKEGCSIRYLVPDKVIDYIQNEGLYEYGL
3MMX Chain:G ((4-190))--------------------------RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQ-----------SVESRLQMLELATEAEEHFSICLEELS----SYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYE---


General information:
TITO was launched using:
RESULT:

Template: 3MMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 824 -156228 -189.60 -908.30
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain G : 0.80

3D Compatibility (PKB) : -189.60
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.653

(partial model without unconserved sides chains):
PDB file : Tito_3MMX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MMX-query.scw
PDB file : Tito_Scwrl_3MMX.pdb: