Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MTLKEEIIQESKRLGIDKIGFTTAEPFDSLKESLEEQKAAGHTSGFEHPNIDERLYPEMTFDQPKSIISIALAYPTRIHEEVPR-DEKRGQFARASWGIDYHDILRDRLNRLIEFIQTRAEKWQKEEEWRLAPQVDTGELIDVAVAQRAGLGFIGRNGLLITEEFGSFVYLGEIVTNIVFEPDKPGEFGCGDCMRCVTACPTKALLGDGRMNAQRCLSYQTQTKGMMPEEYRKKMRNVIYGCDICQLVCPYNQGKDFHFHEEMEPKVDEIYPKLKPMLSMSNKDFKQQFGHLAGSWRGKKPLQRNALIALANLGDRTALPEISECLT-DVRPVIRGTAAWAIGRLGTKEPEKWLDVLDEILAKET-EEVVINELEHAQKLLRRKLK 5D6S Chain:B ((28-398)) MNIKLEIQKMAKEIGISKIGFTTADDFDYLEKSLRLGVEEGRTTGFEHKNIEERIYPKLSLESAKTIISIAVAYPHKLPQQPQKTEFKRGKITPNSWGLDYHYVLQDKLKRLAKGIEKLTE------NFEYKGMVDTGALVDTAVAKRAGIGFIGKNGLVISKEYGSYMYLGELITNLEIEPDQEVDYGCGDCRRCLDACPTSCLIGDGTMNARRCLSFQTQDKGMMDMEFRKKIKTVIYGCDICQISCPYNRGIDNPL--DIDP--DLAMPELLPFLELTNKSFKETFGMIAGSWRGKNILQRNAIIALANLHDRNAIVKLMEIIDKNNNPIHTATAIWALGEIVKKP---DEGMLDYMRGLSPKDEHSQAEWELVCAKWQ----

General information: TITO was launched using: RESULT: Template: 5D6S.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1870 -3089 -1.65 -8.44 target 2D structure prediction score : 0.57 Monomeric hydrophicity matching model chain B : 0.85 3D Compatibility (PKB) : -1.65 2D Compatibility (Sec. Struct. Predict.) : 0.57 1D Compatibility (Hydrophobicity) : 0.85 QMean score : 0.591

(partial model without unconserved sides chains): PDB file : Tito_5D6S.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5D6S-query.scw PDB file : Tito_Scwrl_5D6S.pdb: