Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MENPTFEESLQ-------ELEKIVMQLEQGDVP-----LESALDSFKR------GMELSKHCQDTL---AKAEETLTKMMTESNEEVDFDGNEES-----
2OCC Chain:E ((5-109))HETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV


General information:
TITO was launched using:
RESULT:

Template: 2OCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 215 19502 90.70 263.53
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain E : 0.69

3D Compatibility (PKB) : 90.70
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_2OCC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OCC-query.scw
PDB file : Tito_Scwrl_2OCC.pdb: