Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEFKELEDFIGTHFIYTYDNGWEYEWYAKNDHTVDYRIHGGMVKGRWVKDQEADIVKLTDGVFKITWTEPTGTDVALDFMPNEKKLHGMIFFPKWVEEHPEITVTFQNEHIAEMEAAREKYETYPKLLVPEFATITYMGDAGIDNEDVISEEPYDGMPDDIRSGKYFDENYKRVK
2W2A Chain:B ((4-176))--TFKTLDDFLGTHFIYTYDNGWEYEWYAKNDHTVDYRIHGGMVAGRWVTDQKADIVMLTEGIYKISWTEPTGTDVALDFMPNEKKLHGTIFFPKWVEEHPEITVTYQNEHIDLMEQSREKYATYPKLVVPEFANITYMGDAGQNNEDVISEAPYKEMPNDIRNGKYFDQNYHRL-


General information:
TITO was launched using:
RESULT:

Template: 2W2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 846 -66344 -78.42 -383.49
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.94

3D Compatibility (PKB) : -78.42
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.94
QMean score : 0.614

(partial model without unconserved sides chains):
PDB file : Tito_2W2A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W2A-query.scw
PDB file : Tito_Scwrl_2W2A.pdb: