Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKILTMKKVTKTFGSGHTKVSALKAIDFYVKEGEFVSIIGPSGSGKSTFLTISGGLQTPTSGEIVINGHSLTELPEKKRADLR--FKEIGFILQSSNLIPFLTVKEQFELVDQVTSK---KEDSTKIDSLLQSLDIQSLKNSYPKDLSGGERQRVAIARALYNEPSLILADEPTASLDTDHAYEVVKLLVKEAHEKQKATIMVTHDVRMI-QWSDRVYRMEDGYLTEEEKKKE
2OLK Chain:C ((22-245))-LQMIDVHQLKKSFGS----LEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINL----KAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGM-TMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPED


General information:
TITO was launched using:
RESULT:

Template: 2OLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1141 92 0.08 0.42
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain C : 0.80

3D Compatibility (PKB) : 0.08
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_2OLK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OLK-query.scw
PDB file : Tito_Scwrl_2OLK.pdb: