Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTQEIKKLPVIFLGLFFITVGLNWFLLPHDIASA-GVGAIGHLVETAFSIQRSVTVWSINLMMLLLAAVLLGKSVFFKTVAGSLLFPVVLEIVPKVEMISSHFFSLISGSLLFSLGVYTLYTVGASNG-GITIPPIIFHKFFRL-PMP-QGLLLTNSLIVFLNYYVFGLLETLFVLLSITVSSLFMKILIRLSPVSRKFE---------------------------------------------------------------------------------------------------------------------------------------------- 5GGF Chain:A ((6-555)) RVLDVEVYSSRSKVYVAVDGTTVLEDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDEGSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKGGPVFGEKHSKSPALSSWGDPVLLKTDVPLSSAEEAECHWADTELNRRRRRFCSKVEGYGSVCSCKDPTPIEFSPDPLPDNKVLNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFIDG---------YYEEPMDVVALFGLRGIQHT-----PISIKNARVSQHYKASLTATFNL-----FPEAKFAVVLEEDLDIAV-------DFFSFLSQSIHLLEEDDSLYCISAWNDQGYEHTAEDPALLYRVETMPGLGWVLRRSLYKEELEPKWPTPEKLWD----------WDMWMRMPEQRRGRECIIPDVSRSYHFGIKHKFNTVPGVQLRNVDSLKKEAYEVEVHRLLSEAEVLDHSKNPCEDSFLPDTEGHTYVAFIRMEKDDDFTTWTQLAKCLHIWDLDVRGNHRGLWRLFRKKNHFLVVGVPASPYSVKKPPSVTPIFLEP

General information: TITO was launched using: RESULT: Template: 5GGF.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 901 -66233 -73.51 -413.95 target 2D structure prediction score : 0.45 Monomeric hydrophicity matching model chain A : 0.54 3D Compatibility (PKB) : -73.51 2D Compatibility (Sec. Struct. Predict.) : 0.45 1D Compatibility (Hydrophobicity) : 0.54 QMean score : 0.222

(partial model without unconserved sides chains): PDB file : Tito_5GGF.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5GGF-query.scw PDB file : Tito_Scwrl_5GGF.pdb: