Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MALVKTKLAAAPQPSRTPTPGSSPKEWTPPTHTHESPEHLSTDEPDVLVP----AHKYVYDVKTCAWK----GVDTMLRVL----HPNRGLSQGTMRVCFALEELDE---TGFSSRMVAKMFRHNISKVV-----ESDYFNEGEAQCICGIFAEKFN-------------RVQVPAGFQRHIVS-FLQCETVRIKLSEVPEAYQHKRSGFFSYRTTDS----ADILFTMEPRLAGNFTKYTNNFGDVYDGFERRQSLEEEKKRHRVLMAVEAFSHFTLVES---GGSMLVCDLQGVNDFL--TDPQIHTEDGKGLGMGNMGQDGIRKWMEAHVCNEVCRAIMLEPLSK--------------GLRNFTRTAENESRVSYYQILRA--KLRSQTPVRPEDIIPLSKPLSLMS-DDERLEYAMRL-SALLSE--------
4XGC Chain:D ((5-457))DRELVSIRRFLKERLQRDYTTLRGYAKERSNVRLLLQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSITVQMQLENAADGKVFGSFAENLAFLLQCLKSKSVIFILEEFDLFCAHHNQTLLYNLFDVSQSAQAPICVLGVTCRLDVIELLEKRVKSRFSHRQVFLFPSLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNLQNIQSGALYFSRNHFDPGEYGFSPRLRDAWNKQICKVLATQQARSTLQALHDFDISEAYLKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLS-VLELCLIIAIKHHSQIYDRDSFNFEIIYARFSKFAKVSTTMQAVERSIVLKAFEHLRIAELIMPLTKVQKEFEMHKLALTYSQIHHCMQRYQALPTEVAQWAQSS


General information:
TITO was launched using:
RESULT:

Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1590 12139 7.63 32.99
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain D : 0.63

3D Compatibility (PKB) : 7.63
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.139

(partial model without unconserved sides chains):
PDB file : Tito_4XGC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XGC-query.scw
PDB file : Tito_Scwrl_4XGC.pdb: