Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-FGRRRDGRMPPWEWVTWKD------FCRLTLKKGDEIQSQSKWVAKPGPIGILIQPGVYESFKTDKDCNPKIRRGKLPDG--YTLHGQLKYITPDLASMYNRVLDDTKWWPFDSQEAPQTSTTVEKSL
5J4F Chain:A ((22-119))EVVHFLEGVCFEKLHIEVLNENSSHKEIRICMPKGAVMDKHKA----PGAISVQVLEGKIVFEVGD-------EKIEMPKGALISLEAQVLHRLDALENSVIRLSLSKK--------------------


General information:
TITO was launched using:
RESULT:

Template: 5J4F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 351 21635 61.64 243.09
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 61.64
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.159

(partial model without unconserved sides chains):
PDB file : Tito_5J4F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5J4F-query.scw
PDB file : Tito_Scwrl_5J4F.pdb: