Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMWSYKMLKRLWMIFGPVLIAGLLVFLLIFFYPTEMHHNLGAEKRSAVATTIDSFKERSQKVRALSDPNVRFVPFFGSSEWLRFDGAHPAVLAEKYNRSYRPYLLGQGGAASLNQYFGMQQMLPQLENKQVVYVISPQWFSKNGYDPAAFQQYFNGDQLTSFLKHQSGDQASQYAATRLLQQFPNVAMKDLVQKLASKEELSTADNEMIELLARFNECQASFFGQFSVRGYVNYDKHVAKYLKILPDQFSYQAIEDVVKADAEKNTSNNEMGMENYFYNEQIKKDLKKLKDSQKSFTYLKSPEYNDLQLVLTQFSKSKVNPIFIIPPVNKKWMDYAGLREDMYQQTVQKIRYQLESQGFTNIADFSKDG---GEPFFMKDTIHLGWLGWLAFDKAVDPFLSNPTPAPTYHLNERFFSKDWATYDGDVKEFQ
4JGG Chain:A ((88-179))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QNLASMAQKARAEGAKVLLLGIQLPPNYG------PRYIEAFSRVYGAVAAQEKTA-LVPFFLEGVGGVQGMMQADGIHPALAAQPRLLENVWPTLKPL----------------------------


General information:
TITO was launched using:
RESULT:

Template: 4JGG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 283 -12432 -43.93 -139.69
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -43.93
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.237

(partial model without unconserved sides chains):
PDB file : Tito_4JGG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JGG-query.scw
PDB file : Tito_Scwrl_4JGG.pdb: