Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKISLLGSGRVAFHLAKALLAQGHHIAQVYARDFEKTKKFAEQI----------Q------------A--KACQS-LQEFQPTDLIILAVSDSA--ITELATQVHELF-PKMLMVHTSGSTDIQVISQVH---EKAGVFYPLQTFSLERDVDWKATPLFVEAT--NKDDLVILSDLANSLSKRVYQYTSKQRLTLHLAAVFACNFSNYCFDMAKQVVDAEQVDFGLLYPLILETAKKATENDPKQMQTGPAMRGDQNILVMHQSLLAQANRDDLKQVYQLLSDGIVKRHHSS
3F3S Chain:A ((4-225))GCVVIVGSGVIGRSWAMLFASGGFQVK-LYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPNIQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQCIVAHPVNPPYY------IPLVELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGF------VLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSEGL---------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3F3S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 994 -48355 -48.65 -255.84
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -48.65
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_3F3S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F3S-query.scw
PDB file : Tito_Scwrl_3F3S.pdb: