Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVWIDKLQQLQWQKLDRLSVVVLAILILWLCWKLASFFWLVIAPPQLMQFDRVELGSQQPQIPNISTFSLFNEPSANAAQESVNLELQGVMVGYPNRFSSAVIKIDNTAERYRVGETIGSTSYQLAEVYWDHVVLIQGNGSTRELQFKGLPNGLYQPMTPDASQQSATPSQPTEPMNTAQQALGQAIQQMQGNREQYLRDMGVSGNSGEGYEVTERTPTALRNKLGLRPGDRIVSLNGQAVGQGQTDVQLLEQARRAGQVKIEIKRGDQVMIIQQNF
5B6L Chain:A ((264-331))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGILVMRVLPGTPAERAGIRRGDVIVAVDGTPISDGARLQRIVEQAGLNKALKLDLLRGDRRLSLTVQ-


General information:
TITO was launched using:
RESULT:

Template: 5B6L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 230 -25396 -110.42 -373.47
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -110.42
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_5B6L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5B6L-query.scw
PDB file : Tito_Scwrl_5B6L.pdb: