Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIVERPSYTSKDVEVTSREPLFSGFIQVEKVSLRHRLFNQSEYTPVLQRELVHRPEAAGVLLYNDQKQQFALIEQFRVGALDDSHSPWQL-EIIAGVLDGNESPESCIRCESLEESGCEVQDLEHLFSFYPSAGACSELFHLYVAETN----LPAVGGVFGVDNEGENIQLHLFSYSEIQTLLNSGRLRNAPVIMALQWLAQHSKTIINPKR
3O61 Chain:C ((38-184))------------------------------------------------KREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKAAIEETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRA-------------EDIEVLELPFSQALEMIKTGEIRDGKTVLLLNYL------------


General information:
TITO was launched using:
RESULT:

Template: 3O61.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 590 -26800 -45.42 -200.00
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain C : 0.75

3D Compatibility (PKB) : -45.42
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_3O61.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3O61-query.scw
PDB file : Tito_Scwrl_3O61.pdb: