Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQITPYEVIDGQLKGARQVPSPNFNQRPAGTEIQMIVVHNISLPPSQFGGGYIEQFFQNKLDWSVHPYFQTIEGMQVSTHLLILRTGEVLQFVNFNDRAWHAGRSSYLAKIECNDYSIGIELEGSDDLPFEDLQYEVLTDVVTAIRQAYPEIKNHIAGHSDIAPGRKTDPGPYFKWQHFRQ----LLAQKKT
1J3G Chain:A ((1-187))------MLLDEGWLAEARRVPSPHYDCRPDDENPSLLVVHNISLPPGEFGGPWIDALFTGTIDPNAHPYFAGIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSSYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTNALITRYPAIANNMTGHCNIAPERKTDPGPSFDWARFRALVTPSSHKEMT


General information:
TITO was launched using:
RESULT:

Template: 1J3G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 854 -60702 -71.08 -331.70
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -71.08
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_1J3G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J3G-query.scw
PDB file : Tito_Scwrl_1J3G.pdb: