Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKLNKLMLGLGLTVASVAANAAGYGVIDLAKVVESSTYLKQQNASLNQSVKPTTTKLEQLGKELERLQRQAQTQGQKMKEDEIKKLQSQYQSKLNEFNSTQQGLQSRVQTSLQSMNTTFETRVKQAAEQLRKENNLDFILNKNSTVAYDAKYDLTDKMIQKVNSMK
1SG2 Chain:A ((38-122))---------------------------------------LENEFKGRASELQRMETDLQAKMKKLQSMKA---GSDRTKLEKDVMAQRQTFAQKAQAFEQDRA---RRSNEERGKLVTRIQTAVKSVANS-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1SG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 94 1232 13.10 14.49
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 13.10
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_1SG2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SG2-query.scw
PDB file : Tito_Scwrl_1SG2.pdb: