Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLAIASALLSALAVSGAANAYQAEVGGSYNYLDPDNGSSVSKFGVDGTYYFNPVQTRNAPLAEAAFLNRASNVNAHVNYGDNSGTKDTQYGVGVEYFVPNSDFYLSGDVGRNEREIDNTNIDSKVTTYAAEVGYLPAPGLLLALGVKGYDEKD----------------GKD-GADPTVRAKYVTQVGQHDVNLEAYGAF------GDLDEYKVRGDYYIDKTLSLGVDYYNNDLT-DKDEFGINAKKFLNQQVSVEGRVGFGDNDNTYGVRAAYRF
2POR Chain:A ((147-301))----------------------------------------------------------------------------------------AQEMAVAAAYTFGN--YTVGLGYEKIDSPDTA--LMADMEQLELAAIAKF-GATNVKAYYADGELDRDFARAVFDLTPVAAAATAVDHKAYGLSVDST--FGA--TTVGGYVQVLDIDTIDDVTYYGLGASYDLGGGASIVGGIADNDLPNSDMVADLGVKFKF---------------------------


General information:
TITO was launched using:
RESULT:

Template: 2POR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 531 12707 23.93 97.00
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 23.93
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.112

(partial model without unconserved sides chains):
PDB file : Tito_2POR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2POR-query.scw
PDB file : Tito_Scwrl_2POR.pdb: