Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRPGKKSSSNKSRVMKNKYAHRSWLGAVCLLGCSLSYAAEEQFNDALNAANSGNTALLDQYQLA-MQNDVLGYYPE--------------YWKLNTNLGFQ----SPTSIVSFAQRYPQSAMAEKLAADYVEEKVKQADFASAQPILPYVS---NPDQ-------------------------AENCALAQVRAKSGD-ALVFAEYKDVWLATESQPESCIGLGRMMLSSPLMSTQDKQQRLWVQLRAGLSGQALATAQTLG-L-NLSLAQ-------LNQIQANP------LNYLWSAPKTNDVDYAYLIFALGRLANNDLGNAFANVQRVAQGTPESVQKYLYRTVAYIGGTTVMKNNFNREVLQYFDASYGYPL-SPEEAEIYAR-QAIRFSAWESLIRAIDSMSVSQKQEDRWQYWLARATEQRGDSNSKNTAQCIYKKLAE-SGDDYHNLLAKDRLGVRYNHQPYNDEPTASDLRRLDQNIHFNRAFTLRRINVNPTYTNREWNWAVRQAYL-QHDDGLLLAAAKRAHDMGWYDRAIYAADRTTNKHNDTYRYVTPHKTNVVSHSYNAGIDPAWAYGLMRQESRFVTSARSHVGAGGLMQIMPDTAKLIARQMGETYNPAALSEMNTNIRYGTFYLSMIQGQLSNNPVLATAGYNAGPNRARRWQPDYQPIEADQYTETIPLLETRDYVKHVMTNATHYGVILGQGAQSLIQRMKVIPTRSSP
5G05 Chain:P ((82-537))-------------------------------------QDMDAYTLAKAYFDVKEYDRAAHFLHGCNSKKAYFLYMYSRYLSGEKKKDDET----------VKNEALRELRVELSKKHQARELDGFGLYLYGVVLRKLDLVKEAIDVFVEATHVLPLHWGAWLELCNLITDKEMLKFLSLPDTWMKEFFLAHIYTELQLIEEALQKYQNLIDVGFSK-----------------SSYIVSQIAVAYHNIRDIDKALSIFNELRKQDPYRIENMDTFSNLLYVRSMKSELSYLAHNLCEIDKYRVE---TCCVIGNYYSLRSQHEKAALYFQRALKLNPRYL-----GAWTLMGHE-YME-MKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYYRRAHQLRPNDSRMLVALGECYEKLNQL---VEAKKCYWRAYAVGDVEK--------------------------------MALVKLAKLHEQLT-ESEQAAQCYIKYIQDIYSC----TAFRYLAQYYFKCKLWDEASTCAQKCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5G05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 1666 -1691 -1.02 -4.60
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain P : 0.56

3D Compatibility (PKB) : -1.02
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.361

(partial model without unconserved sides chains):
PDB file : Tito_5G05.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5G05-query.scw
PDB file : Tito_Scwrl_5G05.pdb: