Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMNSSTEQIISNSLSLRLKQETAAEHERMHQ---LMSEAKVFSSKEKYAQFTLSQYYFQLEIEHLFEKEGVAGLIPDL---DIRGRSKQALADLNDLG---------IQPNGQQLQSENVQLPE-----ALGWIYVSEGSTL-GAAFLFKEAQKHLGFSETFAARNLAAYP--EGRAKVWKRFVKALDEAGFDQTQQDRVVQGALDAFGYFGQALDQLDELK--
1N45 Chain:A ((10-223))----------PQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQELLTH


General information:
TITO was launched using:
RESULT:

Template: 1N45.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 668 26596 39.81 140.72
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 39.81
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.437

(partial model without unconserved sides chains):
PDB file : Tito_1N45.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1N45-query.scw
PDB file : Tito_Scwrl_1N45.pdb: