Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPRHSRHSMGLTLLAAPRATPPMKAAAGVSPMKTPAAHEQEVPMHPPEGRHQPLSSRCSSSPAWLRKVKHVGTAARNVLCRLDICWAVFYFVFLVCVGSVSSSISYRLVSRSLIEAGRSLHENRITTVNKLIDQSMDRVDDMAGGLLTLYMKTQFLMQSEKTLSVLCALLERYDEARNYRAFSVISLEQLEMISCWRGSAEADAGGPLIGAISLNHTVNATYYVNRSNYMLNRPLQVSAVIPEGNGTVAALVSNYAASELIEYTQAYYKGSIDSVDIRLRWLQPSSHPHLIYYNYPAGLIYRSLKLPTNVSITDCTQVHIDGARLALNTIGEAKSGFLLAVFINQSLADADPLIMSNNWGQQTVHDNIIFPFSEHAPTAYLKSSNVSHPLMREALKHVDLSRMRDPGYKHSVDFRYNDARAVITVWAYTSCHGLTLPLVYVNSQNTVTGPYLRLHDTLNGVLAAVMVLVSLVFWLFVQLYFAAPLREITRLLNCSVQRGARALYRAGKHGIGALAEVRALGNAHNAAMRQLREVDAFVPAAVRKELPRGTLPAPLTVPIETTLAGLNVVMGSSENRAAHLARHLSTVVYITVRPPQPPPVASHSSSRTPAPLSTQPAGHDAAAITPRCKQRLSVMVQRAVHAVNATSSGPFATPAALEAFASVVHELAHTHRGTVLRLRPDTCILHFHAAVRAHLLPRQEVQLVNAADVDVVTEELAQQDARDAAAFALALLSWVDEQQTAEGQLELPRMPDVRALLDTSLFTCGQYRPADSEQTMTVALGRDVLRDAGSMVERIGVRVAMTEETAARVLRGGSGDSGAAAVSAIPVEALCTGRAEHDADELVLYEALCSRVASGTALPLYARCCFDGFARMRQGDYAGALTAFCGVAAIADLDPGLLPPCLRREVAASGATVGAVSVQVARLMRECERCVRAGVADGFQRVPRRPPGMDAVLPDDITPLGTAPPVSTARSGVPAASAKPRRMASSFTAPPWYPEVGDRHVMLLSNGAVTTRVVVPTPPAWVRDNHGMYWQLACRKSDCTPPELWACRILALGSAGAIASVNYIMYREVHPVVAKAIRDAPPGPISDALRRATPVCGPTAQQDASIKRLITRHQELRHPNILAPLAYSQSVEGGVVLIWEFCPGGTLRQLLARYPRVKSVTFACFGLQMLSALSHLHERGVAHGRLNLDNVMVDSNGHCRLIGQFADHALERE-------IFHFKPSCYLSPAMAAGALPTPPCDMFCYGLLAMEAVT-QQPCWRWATAAEYGGHRDSKPPSAKELADLMATGGQRFADAVVQGRVVLNLEQLDVGPITEHHNDTMISVCRRLLSLDPASRPTAAELREENKSVLNLLGITMEEDTR
4YJR Chain:A ((61-278))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DELLAEANVMQQLDNPYIVRMIGICEA--ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------------EVTAMLE-----------KGER---------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD----------


General information:
TITO was launched using:
RESULT:

Template: 4YJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1032 -77654 -75.25 -369.78
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -75.25
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_4YJR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YJR-query.scw
PDB file : Tito_Scwrl_4YJR.pdb: