Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRDAAATERERLPTPADGDVDSLYEDGTEAETAKQRSTVSTTTLFLALPWLGCTLFLVAVLLYVNVHTFSIWSRLVSMPGGVVADVSVQHRDMARYTVLFVSLALLAVHLAISFCLFRRAYHVLWDVQMSLVELSFMVDVIRTHQHSTFFFVDCVERAQRVRESMRYWVKEFSGFKEICAAEMAVNQVTLRLMTRPRESAQRLESPGDTQLPCTGSGTSSPVQLARGGRLPPDTTAAAFRLPQDAAWSPHVQSVRTDSAHADPGPGRQLAGHHSGSRRSLSFTTEIGIAQVPFEVTLKRRHVALLLLSFLTYRELVRAEAEEARQISRDFIAAVNMCAQRYKGCIVELYSDRAILSWNAFFESAGNYAQTCAQCGECFHDRFVRRFSPESGAYFSTAGYTGHIVCGTTTEKSLLLHGQHVSMLRGLPTLLEMRYCAYVWLGTPPPACTSSPLSWTRIGAVQAGADFSVDLHAMRRTSAEPLPAAMVWHMPQWTTFGDERAVRAEVLTNDGAARLQQDGDTAPVTPASTAASAAATGVATAFPSSPFLSSPLCLRGVGTPYETFYDRSHNRYQLSNTVLGESKSCVVRLAISE-TGNFVAVKEIKIERGDVKPIRRRRYQRENRIIVTRGEKPQWMNEVEIMERH-RHTCIVAYISFVEAEDKLRIVMEYVGGGNLLKFASSSRGAEGEGPPMAVLLRNVVEGLKFLHQKGIVHGDIKPQNVLVPDSGPCKIADFGISRRATTA-VTSAIEGTPFYMSPEATR-------GEVTAACDIWSFGIMMAQVLTGRLPYDASVRDYY--LVSQFMCNKDVKRELHTPLKKPALDVFLACTEYDPGKRKTAKDLLKMPYFTAHAASSTEDA
2Y7J Chain:D ((92-364))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FYQKYDPKDV-IGRGVSSVVRRCVHRATGHEFAVKIMEV---RLSP--------E----QLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV-ALS-EKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQ--YQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE----------


General information:
TITO was launched using:
RESULT:

Template: 2Y7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1181 -7548 -6.39 -29.26
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain D : 0.57

3D Compatibility (PKB) : -6.39
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_2Y7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y7J-query.scw
PDB file : Tito_Scwrl_2Y7J.pdb: