Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILTKVEGPNAAGNKVYVFGVNDYRLEVPERYNVQHFVGRGAYGFVCSAVDAVTNEPVAIKKVTHLFDDAVDAKRVLREVKLLAYLKHPNILSLKDLFKSPDPVDTYSELYVVTDLMESDMDAILRSPRIRLAAGHGQYFTLQLLCALQYIHSAHVLHRDLKPGNLLTDSECNLKLGDFGLARGIGHDDTMTQYVFTRWYRPPELLLVCKHCNYSADMWAVGCLAAEMFTGKPLFPGKDYINQINLIVELLGIPDLARDLPPSTSTEAIHYLSSLPPSKGKKLEEYAPELRRRFDETTFYDSFDTELEEAIAAEGATIARPQPRPPEEYYAEFVDFIFGLLRYNPEKRRTAKESIAHAWLSDVRGPQETIGGCEAERIYRWDADGTAFTIPQLRHLFIDEIGKFASTRGS
4H36 Chain:A ((13-355))------------------------TFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC-PEFMKKL-----QPTVRNYVEN-RPKYAGL--TFP-------------KLFP-------DSLFP---EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA--EVEAPPPQIYDKQLDEREHTIEEWKELIYKEVM--------


General information:
TITO was launched using:
RESULT:

Template: 4H36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1759 -205037 -116.56 -603.05
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -116.56
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.360

(partial model without unconserved sides chains):
PDB file : Tito_4H36.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H36-query.scw
PDB file : Tito_Scwrl_4H36.pdb: