Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------TQKCIITIRKADPALGQDTL-YDLVSLAPNSDLTFG-KIPASMTEVTFGVDEKCQARLVRGDLSRPYEYKGMQN-PLYGLDGPDFVKKLQA-------W-RRKPENSINFSLW-------------------
3MAH Chain:A ((7-151))DCIKAVAAKDGITVIKVKS-SNKLLSWHFMRKLFEIFEFYQEPVDMVAT-SEVGVSLTIDNDKNLPDIVRALSDIGDVTVDKDMVIICIVGVGFEARIINALKGVPVRMISYGGSNYNVSVLVKAEDKKKALIALSNKLFN


General information:
TITO was launched using:
RESULT:

Template: 3MAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 345 -1418 -4.11 -14.18
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -4.11
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.388

(partial model without unconserved sides chains):
PDB file : Tito_3MAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MAH-query.scw
PDB file : Tito_Scwrl_3MAH.pdb: