Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESVALYSFQATESDELAFNKGDTLKILNMEDDQNWYKAEL--RGAEGFVPKNYIRV----KPHPWYSGRISRQLAEETLMK-RNHLGAFLIRESESSPGEFSVSVNY-----GDQVQHFKVLREASGKYFLW-EEKFNSLNELVDFYRTTTIAKRRQIFLCDEQPLIKPSRACFAQAQFDFSAQDPSQLSLRRGDIVEVVEREDPHWWRGRAGGRLGFFPRSYVQPVHL
4U5W Chain:B ((12-161))-IVVALYDYEAIHHEDLSFQKGDQMVVLEE--SGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGND-----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4U5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 509 16626 32.66 121.35
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : 32.66
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_4U5W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U5W-query.scw
PDB file : Tito_Scwrl_4U5W.pdb: