Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MIQSITSQGLVLYNRN---FREDDKLVKIFTEQVGKRMFF---VKHAGQSKLAPVIQPLVLARFLLRINDDGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTL-ELMEAGLDYQVLT-------------NIFEIQILTRFGISL--NFNECVFCHRVGQAFDFSFKYGTCLCPEHYHEDERRCHLNPNIPYLLNQFQAIDFETLETISLKPGIKQELRQFMDQ-----LYEEYVGIHLKSKKFIDSLADWGQLLKEEKK----------------
4A1N Chain:A ((19-311))KAVLEQFGFPLTGTEARCYTNHALSYDQAKRVPRWVLEHISKSKIMGDADRKHCKFKPDPNIPPTFSA-----FNEDYVG--SGWSRGHMAPAGNNKFSSKAMAETFY-LSNIVPQDFDNNSGYWNRIEMYCRELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYKVILARRSSVSTE-PLALGAFVVPN------EAIGFQPQLTEFQVSLQDLEKLSGLVFFPHLDRTSDIRNICSVDTCKLLDFQEFTLYLSTRKIEGSVLRLEKIMVNLKNEIEPDDYFMSRYEKKL


General information:
TITO was launched using:
RESULT:

Template: 4A1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1194 -5045 -4.23 -20.93
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -4.23
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.193

(partial model without unconserved sides chains):
PDB file : Tito_4A1N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A1N-query.scw
PDB file : Tito_Scwrl_4A1N.pdb: