Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKSEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGK--ELVLGPFQGGVSCIRIALGKGVCGEAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMKNGQLLGVLDLDSSEIEDYDAMDRDYLEQFVAILLEKTTWDFTMFEEKS
3MMH Chain:B ((12-162))------AALYREVLPQIESVVADETDWVANLANTAAVLKEAF-GWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGGTVVVGDVDAHPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDETDALYLGELAKILEKRFEA---------


General information:
TITO was launched using:
RESULT:

Template: 3MMH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 746 -43129 -57.81 -289.46
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -57.81
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_3MMH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MMH-query.scw
PDB file : Tito_Scwrl_3MMH.pdb: