Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSHV--RVQIMNQFHRKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILNKLLSYSEDLKHHYQLYQLLLFHFQNKEPEKFFGFIEDNLKQVHPLFQTVFKTFLKNKEKIVNALQLPYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKERTKFVLSRA
1W4S Chain:A ((26-171))MYHVGDYVYVEPAEANLQPHIVCIERLWED-SAGEKWLYGCWFYRPNETFHLATRKFLEKEV-FKSDYYNKVPVSKIL---------GKCVVMFVKEYFKLCPE---------NFRDEDVYVCESRYS-----AKTKSFKKIKLWTMPVSSVRFVPRDV--PLPVVRVASVFA----


General information:
TITO was launched using:
RESULT:

Template: 1W4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 630 -9527 -15.12 -66.16
target 2D structure prediction score : 0.13
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -15.12
2D Compatibility (Sec. Struct. Predict.) : 0.13
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.068

(partial model without unconserved sides chains):
PDB file : Tito_1W4S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1W4S-query.scw
PDB file : Tito_Scwrl_1W4S.pdb: