Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKSFLKTYRTYFISLIIPVVIMSGVYLSQGIYWNSDNSPLLGDGFHQYVIFDVALRNILHGNSSLFYTFTSGLGLNFYALSSYYLGSFLAPLVYFFDLTNMPDAVYLT-TLLKFGLIGLSTFFSLNKLFQSIPQTLKLALSTSYALMSFTVSQLEIKTWLDVFILIPLIITGLHLLITEKKLLLYFTSLSILFIQNYYFGYMTVLFLIFWYLCQISWDFKTRKSSVLDFIVISFLAGMASLIMTLPTLFDLQTHGEKLTEVTKFQTESSWYLDLFAKQFIGSFDTTKYGAIPMIFVGLFPFILTILFFTLKSIKFHVKLIYVIFFAFLIASFYIEALDLFWQGMHTPNMFLHRYAWIFSTLLIYTAAEVLKRLKELKVWNFLVSLFLVVAGFLATIYLKSHYSFLTDLNILLTLEFLVVYSLLLLAVIKKFISVNLFAILISLFILVEMSLNASSQMDGIAKEWGFASRSAYSRDILAMESFSTYIGNQFTRTEKLQTQTGNDSMKFNYNGISQFSSVRNRSSSSTLDKLGFKSSGTNLNLRYANNSILADSLFGIQYNISDSPIDKYGFKDIYQKDNLTLYENQYSLPIAVASQSVYNDVKFNEHTLDNQASFLNQLANVNFDYFSPIPYEKTEKIENTNDLISVTSSSNEDAAIQYQIEVPENSQVYLSFINLHFSNDKQKKVDILVNGEKKTFTTDNVFSFFNLGYTKEKKTFNINVSFPGNSQVSFESPTFYRLDTKTFTEAIQKIKEQPVTVSTSKNKVFATYDVQQDTSIFFTIPYDKGWSAYQDGKKIEIKQAQTGFMKVDIPKGKGTITLSFIPNGFITGAICSFTSLLLFGIYNHRRKSSKA
5LNK Chain:L ((1-599))MNLFSSLTLVTLILLTMPIAAIN-----------FNTHKFTNYPLYVKTTISCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSFKMDFFSMMFVPVALFVTWSIMEFSMWYMHSD----------------------------------PNINQFFKYLLLFLITMLILVT-------ANNLFQLFIGWEGVGIMSFLLIGWWY------GRTDANTAALQAILYNRIGDIGFILAMAWFLINLNTWD--LQQIFMLNPNDS----------------------------NLPLMGLILAATGKSAQFGLH----------------PWLPSAMEGPTPVSALLH------SSTMVVAGIFLLIRFYPLTENNKFGQSIMLCLGAMTTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDE----------QDIRKMGGL--FKAMPFTTTALIIGSLALTGMPFLTG-------------------------------FYSKDLIIESANTS------------------YTNAWALLMTLVATSFTAIYSTRIIFFA------LLGQPRFPT---LININENNPFLINSIKRLLIGSLFAGFIISNNIPPMTIPQMTMPHYL--------------KMTALTVTILGFILALEISNTTHYLKFNYPSNTFKFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLETILPKT-----------------------------------ISLAQMK---MSTTITSQKGLIKLYFLSF-LITILIST-------------------


General information:
TITO was launched using:
RESULT:

Template: 5LNK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 2888 -313869 -108.68 -524.86
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain L : 0.61

3D Compatibility (PKB) : -108.68
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.176

(partial model without unconserved sides chains):
PDB file : Tito_5LNK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LNK-query.scw
PDB file : Tito_Scwrl_5LNK.pdb: