Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKTNIILAVLIGLIVGGVIGAFGYAKTAAKYDAISTACVMMNEAVENNLLTVEQVKTL----GELTGTNMKKDYPTVASKFAFSPENLKNASEASNCSQFIVGFNQSK
2DDH Chain:A ((575-622))---------------------------------------------LEGSIITGAQLSQVNARILELL-TLIRPNAVALVDAFDFKDMTLGSVLG---------------


General information:
TITO was launched using:
RESULT:

Template: 2DDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 23 -4070 -176.96 -92.50
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -176.96
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.654

(partial model without unconserved sides chains):
PDB file : Tito_2DDH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DDH-query.scw
PDB file : Tito_Scwrl_2DDH.pdb: