Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDINDYEDAEDSAVDEDEAKAAESGAADEEAGNLTDADLAEAETLTVTAKQKQRQALEDEVAAFLARGGRITEVPPDEHSDR
4YF0 Chain:B ((18-46))----------------------------------------------SKTQAKAALESTLAAITESLKKGDALQ----------


General information:
TITO was launched using:
RESULT:

Template: 4YF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 13 -1525 -117.27 -56.46
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -117.27
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.942

(partial model without unconserved sides chains):
PDB file : Tito_4YF0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YF0-query.scw
PDB file : Tito_Scwrl_4YF0.pdb: