Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSAVVVSSENLDGQQQSSSTPASPAAEKVNLLGMSRAELEKFFEDIGEKKFRAGQVMKWIHQYFVTDFAEMTNISGKLRAKLEQICEIKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQG--------FQRDLTPDEIIGQLWMANYSYMEEVPVAERERSVTNVVMMGMGEPLLNYDAVLSSMHIMLDDFAYGMSKRRVTLSTSGVVP-K-IDQLAKDIDV-ALAISLHAPNDELRNELVPINKKYPLAQLIAACQRYIAKDGNESARKHVTIEYVMLEGVNDQPEHAQQLLKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIISFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWQKKVAQRQEILRTQG
2FB2 Chain:A ((14-202))-------------------------------------------------------------------------------------------------------------------------------------RDLALSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAE------------LGVKKIRITG-GEPLMRRD-LDVLIAKLNQIDGI----EDIGLTTNGLLLKKHGQKL-YDAGLRRINVSLDAIDDTLFQSINNR--NIKATTILEQIDYATSI------GLNVKVNVVIQKGIN--DDQIIPMLEYFKDKHIEIRFIEFMDVGND----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2FB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 824 -4162 -5.05 -23.38
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -5.05
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.544

(partial model without unconserved sides chains):
PDB file : Tito_2FB2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FB2-query.scw
PDB file : Tito_Scwrl_2FB2.pdb: