Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMMAKENTQQKEIKRQPAVELAVFNLNSVTDVADLQMIASQVQLYLQVCGSTTLEQIKSKANITTVANIFALTGSVLDLMLYATDKKTGDAAVQRGALLAANLIGLFSEPNNEAHARMALRPMFGLMAECLYRENGKIKETDIKRLGLHFNAMIAGDLENFLKETQAKLSSLLISATTLGVTILQSMATPATGINAGITTAAGASAEKRDPKLKFTNWAVPLIDLLGKPSQANLTPKIQPNITSRLQQEATQAIAALSQTLQQQANAGQKYTLAWLLQETLKAIQALENKGNASVPVNQTGEYERHTKGDTLEFVSLQADALNAPPCEGADSQSGKSISYSIGAERVQHADFYLPKIGFSFIRQYNSQMDEFDQSMVGARWMMPFSNMIQRTAQGYLFIDSKGRKHQLPASIIFETYEVPYEGIIVQPLKNGDLVLNFGGDWTFQFHQFSVGQPYQLIQQFNEKTQEKIDLSYLIFEKVAYLQCVNFQLEHAKHQLKFAFNEQVKIMAVFLDDNAEPLAHYDYDTQGNLIKAIDQNGHTRTYEYNYFHQLTRYTDRTGRGQNIRYESTDAKAKAIEEWADDGSFHTKLKWHPRLRQVAVYDAYDVPTYYYFDLNGFTYRTRLADGRESWYSRDGKKRITRQIDFEGRETQQEYNDQDQLVKIVQPNGGIIRFEYNEQGNLVEIKDPEGSIWKREYDENRNVSKEINPLGHITQYKYNNDNQLVEVIDAKGGVKKIQYNELGQMISYTDCSGKSSIWEYDEDGVLTAEQTAKNKVVQYFYSTKGRDKGQLQSIIYPDGLKEYFEHDEEGRLLKHIDTKG-----------LVTEYKYNQVGLLEQRIDANRHSVTYQWDKQGRIQKLINQ----NQAEYLFGYNPYGYLIREQAFDGEEKHYSYNENGRLFKIRQPNTLTEFDYYADGQIASKSFTHLHTGQKQTEQFDYNLNSQLSRASNEVSQIDFYRNALGQLVREHQHYKIPELKPLTAVLHYEYDELGNLIKTIRPDGHTLNHLVYGSGHIYAIGLNNQEVVSFQRDDLHRETTRLLANGLMQTKQYNDVGLLSSQFIQPEQETQDYLQYQAHRKYHYDKNYLLSQVEDSRLGKLNYQYDPIGRLIAAQSLHKTESFNFDPAGNLIDSDSVLSPAQIKNNLIKSYKGKHYQYDVQGNVTEIIQAGKNLKLTWDNQNRLIRSDNNGLVTEYGYDVFGRRLYKKTTNELTLFGWDGDLMIWESFKSAQTNYTKHYIYEPDSFVPLLQTGYKDLIQLIETPDYQEYQTKPYSIYKDPVWNSTTRKKRADLEQITFYHCDQVGIPQTMTNIRGECVWEILQDTWGAVSQIKALNQDNPFEQNNLRFQGQYYDQETELHYNRYRYYEPHSARYVSKDPIGLEGGMNTSSYVSDPNQWIDPKGLNSFNYGEMFGIPASAQSGLAYQGQRNYECYAETGELCKIKVPPLFDYVACSGGGLGIGVGFVKNQWTGEYYISGSKDSLLIPVAKSVAQNKQFSAKDLAGASCVGGNIHNIPSYTKTTMAMGEITNEFVSGASVTVGGGAYGAVANVVVPLVSKSSPVKGTWASELGVGTPGFNVGVSGTVSVDTILDAVKPSKK
4GHB Chain:B ((42-129))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HTYLYNSAGRLTGYTGKQSFTAGDELFEIENTTTVEYKDHQ-AV-ITDEAGTVSTYTLNDKGYATTCTSQDMAGNTRTYTFSYLINT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4GHB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 209 4478 21.42 63.96
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain B : 0.53

3D Compatibility (PKB) : 21.42
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.498

(partial model without unconserved sides chains):
PDB file : Tito_4GHB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GHB-query.scw
PDB file : Tito_Scwrl_4GHB.pdb: