Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIQGKHFVITGGGSGLGAATAEYLVKQGASVTLVDMNVEAGEQQAKHLGPKAGFVKLDVTDEATAEQFFKDVLVKHGHLHGLVNCAGIGPSAKVVGREGVHDLGLFAKTLNINVTGTFNMLRFAADAMSKNTVEEGEEDRGIIVNTASVAAFDGQIGQAAYSASKGAIVAMTLPIARELARHAIRIMTIAPGIMETPMLKGMPQNVQDALGQMVPYPSRLGKPEEFARLVAHIAENSYLNGEVIRLDGAIRMAAK
4XGN Chain:F ((9-260))MEIRDNVFLITGGASGLGAGTARLLTEAGGKVVLADLNQDAGEALARELG--GVFVRCDVAREEDAQAA-VAAATKLGTLRGLVNCAGIAPAAKTVGKDGPHPLELFAKTITVNLIGTFNMIRVAAAAMAANEPAPTGE-RGVIVSTASVAAFDGQIGQAAYAASKAGVAGMTLPIARDLSRNAIRVMTIAPGIFETPMLLGMPQEVQDALGAMVPFPPRLGKPAEYAMLVRQIFENPMLNGEVIRLDGAIRMQPK


General information:
TITO was launched using:
RESULT:

Template: 4XGN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1456 -155351 -106.70 -616.47
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain F : 0.89

3D Compatibility (PKB) : -106.70
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.615

(partial model without unconserved sides chains):
PDB file : Tito_4XGN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XGN-query.scw
PDB file : Tito_Scwrl_4XGN.pdb: