Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNKTIILGGFTEMKKAKLFGLGAVALAAGLFLGACGNNGSTDSSGGKSSSDTTTAALITDTGGVDDRSFNQSAWEGLEKWGKDQGLSRGNDG-FQYFQS-SNESDYIPNIDQALNAGFKTIFGIGYKLKPAIQEQATNNTGTNFVIIDDVIDGLDNVVSATFKDNEASYLAGVAAAYTTETNVVGFIGGVKG-----------EVIDRFDAGFKAGVDAGAKELGKEIKVLNQYAGDFSAPDKGRSIAQGMYA--QNADIIFHASGGTGNGVFQEAKSLNESGDKKVWVIGVDRDQSDEGEYTLNGEKKNFTLTSTLKAVGTVVEDLAQKSADGKFPGGEHTVYGLKEDGVGLTEGQLSDEAKKAVDEAKEKIISGDVKVPETPEEN
5UFH Chain:A ((66-321))-----------------------------------------------------GLLGLAI-FD--FSQPFASYLADQIIVCAREH------HYGVIINTYGQNEHGLARAMRQANNLAADGWIVFADHAMGQ--KM--LDQSYPLVLTGDWDA-YGKVDQVTMPNVEAMRYTTNRLLDS-GYRSIALFGADGSLGARHYRQATEGTQELRVQGYMQAYEEH-G---IEARMDMLFSGGLLTSDSGVRATNLMMDQGVRPDAIICLNDAMALGALHQLQVRGIRVPDDVQVVGFDNVPE--------ATYANPSLTTIDPHIDSYARHAVDMLIE------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1274 8994 7.06 37.63
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 7.06
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_5UFH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UFH-query.scw
PDB file : Tito_Scwrl_5UFH.pdb: