Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRGYVQMEKSEGSLRRKSMNPVSPLFEKIDASIEKKANLFENSFSRYAVRAVLACLFLTLGTAVAFAIAMKGEDIAHGLGKILYAFMFSWGLVMILYMNAELGTSNMLYMTVGVFRQRLALSKAAKILFACIFFNMIGGILCGFLISMTTPFQDLTLDNFMLESIAVKLAKPSATILVEGMFANIVVNTAVLISMRMKEDVGKVITVVFIIFIFAFLGYEHVIANFPAFTLTYFASHGQMDGMTVSNVLHNLFFALAGNYIGGGLVMGLGYAWLNQSKSSYVD
4FC4 Chain:I ((3-250))----------------------TDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLL---DPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMAIRTE-GTAKFLAIWWCLLAFIASGYEHSVANMTLFALSWFGHHS--DAYTLAGIGHNLLWVTLGNTLSGVVFMGLGYWYATP-------


General information:
TITO was launched using:
RESULT:

Template: 4FC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 1309 -224116 -171.21 -903.69
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain I : 0.77

3D Compatibility (PKB) : -171.21
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.323

(partial model without unconserved sides chains):
PDB file : Tito_4FC4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FC4-query.scw
PDB file : Tito_Scwrl_4FC4.pdb: