Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEPLIVIKGAKKIIRNKTILHLDRFTADAGDLVTVVGESGAGKSTLLNILGLNDQFSSGQFYLFDQETKQLTGREKRLIK-RNTISFLFQDFGLIEYETIDFNLDIG-LKFSNLNVSDKRTAKYEALKKVNINKKLSTPIYTLSGGEKQRIACARVLLKNSKIILADEPTGSLDKRNKDKVVEILSQQASQGTLVIVVTHD-PYLTKIGNKKIML
2OLK Chain:C ((50-232))-----------------------------GEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIII---DGINLKAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFAREVGDRVLFM


General information:
TITO was launched using:
RESULT:

Template: 2OLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 848 -8373 -9.87 -46.51
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.76

3D Compatibility (PKB) : -9.87
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_2OLK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OLK-query.scw
PDB file : Tito_Scwrl_2OLK.pdb: