Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHQVYIDLIMSVLLEQFETEKNFLDEYLLISPEQWQKWKDGEKNLPSEAMQKVKNLFTDYEWMLTQKILRQTIIFPEKRNVAVAEYKQIKTRIAQKWLSSKAAKVELIPLKNNQQAGRYLDLKVSIQYDEWGYDDILNFRLPADVQKQIEGEKIELLDWVNENLEETYVHEANGEREEQRKDFSSE-
5IK2 Chain:P ((1-134))MATVQVDIVTP----ERKVFQGEADIVIARGVE-------GELGVMAGHIPLVTPLKT-APVRIKQG--------DKETLIAVSG-----------------GFLEVRPD------------KVNILADTAELPEEI----AVEAAKKAKARHETILKRLDKTDKDYLRHKRALERAEVRLQVANSK


General information:
TITO was launched using:
RESULT:

Template: 5IK2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 579 -44613 -77.05 -335.43
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain P : 0.64

3D Compatibility (PKB) : -77.05
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.257

(partial model without unconserved sides chains):
PDB file : Tito_5IK2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IK2-query.scw
PDB file : Tito_Scwrl_5IK2.pdb: