Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDVKGKNVFITGSTRGIGKAMALAFAKAGANIILNGRGEIPKEKIEEIEAFGVKCVGVSGDISDYEKAGQMIKEAEEKLGSIHVLVNNAGITNDKLVMRMDAEDFKKCLDINLIGTFNMTQHVLKKMMKQREGAIINLSSVSGLIGNIGQANYAASKAGVVGLTKSVAREAATRGITCNAIAPGFITTDMTEVLADKVKEQAEKQIPMQRFGQVEDIAQTAVFLA--QNPYITGQVINVDGGLVMHG
4I08 Chain:B ((8-250))MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDY--LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIET--TKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYM--


General information:
TITO was launched using:
RESULT:

Template: 4I08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1329 -118385 -89.08 -495.33
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.87

3D Compatibility (PKB) : -89.08
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_4I08.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4I08-query.scw
PDB file : Tito_Scwrl_4I08.pdb: