Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAELINGKELAEKMQAEIAEKIQKLKDNGIHPGLVVLLVGENPASQIYVRNKERVAKEIGIHSLVERYPETISEDELLAEIEKYNQDPSFHGILVQLPLPKHIDEEKILLAIRPEKDVDGFHPMNLGRLLAGKPDKIPCTPYGIMKMFEAYSIDPAGKRAVVIGRSNIVGKPMAQLLLMADATVTVAHSKTENLAELAQEADILVVAIGRGHFVTKEFVKPGAVVIDVGMNRDANGKLIGDVKFDEVEPIAGWITPVPKGVGPMTITMLMYQTVKSAEAFGAGE
3NGL Chain:C ((2-270))--KILRGEEIAEKKAENLHGIIER---SGLEPSLKLIQIGDNEAASIYARAKIRRGKKIGIAVDLEKY-DDISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALNREFLVPATPRAVIDIMDYYGYHE--NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINY-VNDKVVGDANFEDLSEYVEAITPVPGGVGPITATNILENVVKAAE------


General information:
TITO was launched using:
RESULT:

Template: 3NGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1450 -186160 -128.39 -692.04
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain C : 0.81

3D Compatibility (PKB) : -128.39
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.628

(partial model without unconserved sides chains):
PDB file : Tito_3NGL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NGL-query.scw
PDB file : Tito_Scwrl_3NGL.pdb: