Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVGCDGKVEHYRIMYHA------------------SKLSIDEEVYFENLMQLVEHY
2DVJ Chain:A ((13-104))WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRI-GDQEFDSLPALLEFY


General information:
TITO was launched using:
RESULT:

Template: 2DVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 223 -24295 -108.94 -328.30
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -108.94
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.388

(partial model without unconserved sides chains):
PDB file : Tito_2DVJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DVJ-query.scw
PDB file : Tito_Scwrl_2DVJ.pdb: