Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQCYTDVTEFAIPASTQKLYLSPVLDGFNSEIIAYNLSTSPNLEQVQTMLEQAFTEKHYENTILHSDQGWQYQHDSYHQFLEGKGIQASMSRKGNSQDNGMMESFFGILKSEMFYGYEKTFKSLNQLEQAIVDYIDYYNNKRIKVKLKGLSPVQYRTKSFG
1BL3 Chain:C ((9-154))PGIWQLDCTHL------EGKVILVAVHVASGYIEAEVIPA-ETGQETAYFLLKLAGRW-PV-KTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQV----RDQAEHLKTAVQMAVFIHNH-KRKGGIGGYSAGERIVDI--


General information:
TITO was launched using:
RESULT:

Template: 1BL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 683 -68330 -100.04 -468.01
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain C : 0.65

3D Compatibility (PKB) : -100.04
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.320

(partial model without unconserved sides chains):
PDB file : Tito_1BL3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BL3-query.scw
PDB file : Tito_Scwrl_1BL3.pdb: